Topic 159

plant plants arabidopsis thaliana biology benthamiana nicotiana leaf crop leaves maize seed crops mutants sentence tomato genes monocots transgenic biosynthesis cas9 crispr mutant traits species dicot root seeds monocot transient transformation epidermal development growth germination stomatal barley rice land gene photosynthesis solanum chloroplasts roots lycopersicum accumulation responsible report complementation fluorescent syringae rapid c4 editing silencing developmental efficiency trichome fruits kai2 has chloroplast eudicot transformants phenotyping improvement mays system zea experiments gfp solanaceae constructs guard fruit will heat angiosperms organs specialized defense water green seedling efficient pathway expression synthase patterning evolved conserved wall adapted seedlings exogenous roles trait flowering acylsugars phenotypes

111 items. Top items listed below.

Addition of Multiple Introns to a Cas9 Gene Results in Dramatic Improvement in Efficiency for Generation of Gene Knockouts in Plants 159 33 16 9

The circadian clock contributes to the long-term water use efficiency of Arabidopsis 159 16

A role for neutral variation in the evolution of C4 photosynthesis 159 16 5

VipariNama: RNA vectors to rapidly reprogram plant morphology and metabolism 159 16

The Genetic Architecture of Leaf Stable Carbon Isotope Composition in Zea mays and the Effect of Transpiration Efficiency on Elemental Accumulation 159 53 16 5

Quantitative imaging of RNA polymerase II activity in plants reveals the single-cell basis of tissue-wide transcriptional dynamics 159 16

Leaf trichome distribution pattern in Arabidopsis reveals gene expression variation associated with environmental adaptation 159 16 5

A viral guide RNA delivery system for CRISPR-based transcriptional activation and heritable targeted DNA demethylation in Arabidopsis thaliana 33 16

A heat-shock inducible system for flexible gene expression in cereals 159 16

Bipartite influence of abscisic acid on xylem differentiation trajectories is dependent on distinct VND transcription factors in Arabidopsis 16 3

Arabidopsis thaliana interaction with Ensifer meliloti can support plant growth under N-deficiency 159 16 12 5

An ABA-GA bistable switch can account for natural variation in the variability of Arabidopsis seed germination time 159 16 5

Multi-omics approach highlights differences between functional RLP classes in Arabidopsis thaliana 134 9 5

Host-induced gene silencing involves transfer of dsRNA-derived siRNA via extracellular vesicles 159 16 3

The conserved plant PM19 protein functions as an osmosensor and regulator of germination 159 16 3

The vesicular trafficking system component MIN7 is required for minimizing Fusarium graminearum infection 159 16 12 3

Genome-wide chromatin binding of transcriptional corepressor Topless-related 1 in Arabidopsis 16 9 3

Expression of Castanea crenata Allene Oxide Synthase in Arabidopsis Improves the Defense to Phytophthora cinnamomi 16 3

A Failure Mode and Effect Analysis of plant metabolism reveals why cytosolic fumarase is required for temperature acclimation in Arabidopsis 159 16

Recombinase-mediated integration of a multigene cassette in rice leads to stable expression and inheritance of the stacked locus 159 33 16

Phosphoproteomics after nitrate treatments reveal an important role for PIN2 phosphorylation in control of root system architecture. 16 9 3

Mitochondrial fostering: the mitochondrial genome may play a role in plant orphan gene evolution 21 16 5 4

Altered stomatal patterning accompanies a trichome dimorphism in a natural population of Arabidopsis 159 106 16 5

Organ-specificity of sterol and triterpene accumulation in Arabidopsis thaliana 159 16

A comprehensive toolkit for quick and easy visualization of marker proteins, protein-protein interactions and cell morphology in Marchantia polymorpha. 159 18 16

Building a robust chromatin immunoprecipitation (ChIP) method with substantially improved efficiency 159 16 4

Developmental Normalization of Phenomics Data Generated by High Throughput Plant Phenotyping Systems 159 16 4

Endosperm development is an autonomously programmed process independent of embryogenesis 159 16

Visualization of spatial gene expression in plants by modified RNAscope fluorescent in situ hybridization 159 18 16 4

Coronatine contributes Pseudomonas cannabina pv. alisalensis virulence by overcoming both stomatal and apoplastic defenses in dicot and monocot plants 159 16 12 3

OsNLP4 is required for nitrate assimilation gene expressions and nitrate-dependent growth in rice 16 3

Epigenetic transgenerational effects on RNAi in Arabidopsis 159 16

Optical topometry and machine learning to rapidly phenotype stomatal patterning traits for QTL mapping in maize 159 53 16 5

The impact of chromatin remodeling on gene expression at the single cell level in Arabidopsis thaliana 43 31 9 3

Host auxin machinery is important in mediating root architecture changes induced by Pseudomonas fluorescens GM30 and Serendipita indica 16 3

Robotic Assay for Drought (RoAD): An Automated Phenotyping System for Brassinosteroid and Drought Response 159 16

A simple high efficiency and low cost in vitro growth system for phenotypic characterization and seed propagation of Arabidopsis thaliana 159 16

Overexpression of the transcription factor GROWTH-REGULATING FACTOR5 improves transformation of dicot and monocot species 159 16 3

iDePP: a genetically encoded system for the inducible depletion of PI(4,5)P2 in Arabidopsis thaliana. 16 3

An improved Nicotiana benthamiana strain for aphid and whitefly research 159 16

Disruption of CYCLOPHILIN 38 function reveals a photosynthesis-dependent systemic signal controlling lateral root emergence 16 3

LED light gradient as a screening tool for light quality responses in model plant species 159 16 5 4

Comparative transcriptomics identifies differences in the regulation of the floral transition between Arabidopsis and Brassica rapa cultivars 16 9 5

Agromonas: a rapid disease assay for Pseudomonas syringae growth in agroinfiltrated leaves 159 16 12

The mammalian CLU homolog FMT controls development and behavior in Arabidopsis 16 3

Topically delivered 22 nt siRNAs enhance RNAi silencing of endogenous genes in two species 159 16 10

A multiple ion-uptake phenotyping platform reveals shared mechanisms that affect nutrient uptake by maize roots 53 16 5

A centrifuge-based method for identifying novel genetic traits that affect root-substrate adhesion in Arabidopsis thaliana 159 16 4

Application of aptamers improves CRISPR-based live imaging of plant telomeres 159 33 16 8 3

The FUSED LEAVES1/ADHERENT1 Regulatory Module Is Required For Maize Cuticle Development And Organ Separation 159 16 3

A series of dual-reporter vectors for ratiometric analysis of protein abundance in plants 159 16

Organization and control of the ascorbate biosynthesis pathway in plants 159 16 3

Distinct Cellular Strategies Determine Sensitivity to Mild Drought of Arabidopsis Natural Accessions 16 5 3

Immunocapture of dsRNA-bound proteins provides insight into tobacco rattle virus replication complexes and reveals Arabidopsis DRB2 to be a wide-spectrum antiviral effector 41 16 12

High-resolution temporal transcript profiling during Arabidopsis thaliana gynoecium morphogenesis uncovers the chronology of gene regulatory network activity and reveals novel developmental regulators 16 9 3

The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana. 81 16 3

Telomere length and TERT expression are associated with age in almond (Prunus dulcis) 159 53 16 5

Autophagic degradation of the Cucumber mosaic virus virulence factor 2b balances antiviral RNA silencing with proviral plant fitness and virus seed transmission 41 16 3

Intragenic Complementation of Cellulose Synthase-Like D1 alleles in Root Hair Development 159 16 3

Requirement and functional redundancy of two large ribonucleotide reductase subunit genes for cell cycle, chloroplast biogenesis in tomato 159 16 3

Root growth responses to mechanical impedance are regulated by a network of ROS, ethylene and auxin signalling in Arabidopsis. 128 16 3

Targeted genome editing in Nicotiana tabacum using inducible CRISPR/Cas9 system 33 16 9

Altering PRC2 activity partially suppresses ddm1 mutant phenotypes in Arabidopsis 93 81 31 16 9 3

Age, wound size and position of injury - dependent vascular regeneration assay in growing leaves 159 16

Within and cross species predictions of plant specialized metabolism genes using transfer learning 105 26 16 4

Efficient Cas9 multiplex editing using unspaced gRNA arrays engineering in a Potato virus X vector 33 7

Environmental RNA interference in two-spotted spider mite, Tetranychus urticae, reveals dsRNA processing requirements for efficient RNAi response 196 159 16 9

Momilactone B inhibits Arabidopsis growth and development via disruption of ABA and auxin signaling 16 3

Genome-wide Association Studies Reveal Important Candidate Genes for the Bacillus pumilus TUAT-1-Arabidopsis thaliana Interaction 16 12 5

One-shot generation of duodecuple (12x) mutant Arabidopsis: Highly efficient routine editing in model species 33 16

Ptr1 evolved convergently with RPS2 and Mr5 to mediate recognition of AvrRpt2 in diverse solanaceous species 159 16 12

Unraveling transcription factor functions through integrative inference of transcriptional networks in Arabidopsis thaliana yields novel regulators involved in reactive oxygen species stress signaling 134 31 16 9 4

Development of transient expression assay for Cannabis sativa which revealed differential Agrobacterium susceptibility among cannabis cultivars 159 16

Loss of rice PARAQUAT TOLERANCE 3 confers enhanced resistance to abiotic stresses and increases grain yield in field 16 3

Cadmium interference with iron sensing reveals transcriptional programs sensitive and insensitive to reactive oxygen species 7 3

Co-expression networks from gene expression variability between genetically identical seedlings can reveal novel regulatory relationships 134 9 5 4

Genome-wide predictions of genetic redundancy in Arabidopsis thaliana 134 16 9 5

A vector system for fast-forward in vivo studies of the ZAR1 resistosome in the model plant Nicotiana benthamiana 159 16

Genetic mapping of the early responses to salt stress in Arabidopsis thaliana 16 9

The tomato DELLA protein PROCERA promotes ABA responses in guard cells by upregulating ABA transporter 16 3

Using single-plant -omics in the field to link maize genes to functions and phenotypes 16 4

Arabidopsis thaliana zinc accumulation in leaf trichomes is correlated with zinc concentration in leaves 106 16

Role for novel family of pathogen-induced cysteine-rich transmembrane proteins in disease resistance 16 3

Impaired chloroplast positioning affects photosynthetic capacity and regulation of the central carbohydrate metabolism during cold acclimation 117 16 5

miR156-mediated changes in leaf composition lead to altered photosynthetic traits during vegetative phase change 7 5

Basal leakage in oscillation: coupled transcriptional and translational control using feed-forward loops 16

WHIRLY1 of barley and maize share a PRAPP motif conferring nucleoid compaction 159 16 3

Evidences for a nutritional role of iodine in plants 16 3

Aphid feeding induces the relaxation of epigenetic control and the associated regulation of the defense response in Arabidopsis 81 16 9 3

Identification of plant enhancers and their constituent elements by STARR-seq in tobacco leaves 134 33 16 9

A virus-encoded protein suppresses methylation of the viral genome in the Cajal body through its interaction with AGO4 159 16 3

Host-parasite tissue adhesion by a secreted type of β-1,4-glucanase in the parasitic plant Phtheirospermum japonicum 16 9

Widespread targeting of development-related host transcription factors by phytoplasma effectors 143 16 12 9

Modeling gene regulation in response to wounding: temporal variations, hormonal variations, and specialized metabolism pathways induced by wounding 134 16 9 3

The histidine phosphotransfer AHP4 plays a negative role in Arabidopsis plant response to drought 128 16 3

Temporal dynamics of QTL effects on vegetative growth in Arabidopsis thaliana 53 16 9 5

Several geranylgeranyl diphosphate synthase isoforms supply metabolic substrates for carotenoid biosynthesis in tomato 159 16 3

The Sequenced Genomes of Non-Seed Land Plants Reveal the (R)Evolutionary History of Peptide Signaling 159 16 5

A curated list of genes that control elemental accumulation in plants. 159 16 9 5

Dissection of PRC1 and PRC2 recruitment in Arabidopsis connects EAR repressome to PRC2 anchoring 159 16 3