weitrix_randomize.RdValues are generated with variance equal to 1/weight. This can be used to see what R-squared would be achieved with purely random data, and therefore an appropriate number of components to use. This is known as Parallel Analysis.
weitrix_randomize(weitrix)
| weitrix | A weitrix object, or an object that can be converted to a weitrix
with |
|---|
A SummarizedExperiment object with metadata fields marking it as a weitrix.
weitrix_randomize(simwei)#> class: SummarizedExperiment #> dim: 7 5 #> metadata(1): weitrix #> assays(2): x weights #> rownames(7): 1 2 ... 6 7 #> rowData names(0): #> colnames(5): 1 2 3 4 5 #> colData names(1): true_score