Package index
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vst() - Variance Stabilizing Transformation
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shiny_report() - Shiny report
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plot_stability() - Stability plot.
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plot_biplot() - Biplot of expression data
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plot_heatmap() - Plot a heatmap.
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samesum_log2_norm()samesum_log2_cpm() - Normalized log2 counts using samesum method
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call_ui() - Call object with "request" if it is callable.
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composable_shiny_app() - Composable Shiny App.
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ensure_reactable() - Flexible specification of parameters to shiny apps.
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ensure_reactive() - Make a value reactive if it is not already reactive.
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heatmap_grob() - A grob for heatmaps.
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make_ordering() - Make an object representing an ordering, usually from a hierarchical clustering.
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ordering_grob() - Grob to display an ordering as a dendrogram.
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run_as_gadget() - Run a composable shiny app as a gadget.
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shiny_biplot() - Shiny wrapper for plot_biplot
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shiny_filter() - Shiny component to filter rows and columns a matrix.
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shiny_heatmap() - Shiny wrapper for plot_heatmap
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shiny_mds_plot() - Shiny wrapper for limma's MDS plot
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shiny_plot()shiny_plot_ui()shiny_plot_server() - Shiny plot.
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shiny_stability() - Shiny wrapper for plot_stability
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shiny_vst() - Shiny component to describe the output of a call to vst.
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shrinktext_grob() - A collection of horizontal labels which shrink if they get too small.
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signed_colors - A red-blue palette suitable for signed data.
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unsigned_colors - A palette from cool to hot.
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varistran_grob() - Make a grob better.
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vertical_shrinktext_grob() - A collection of vertical labels which shrink if they get too small.
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vst_advice() - Advise how VST will transform data