For all possible absolute log2 fold changes, which genes have at least this fold change at a specified False Discovery Rate?
limma_confects(fit, coef = NULL, fdr = 0.05, step = 0.01, trend = FALSE)
A limma MArrayLM object.
Column number of coefficient or contrast to test.
False Discovery Rate to control for.
Granularity of log2 fold changes to test.
nest_confects for details of how to interpret the result.
fit should be produced using
lmFit, and optionally
contrasts.fit if a contrast is needed. It is not necessary to use
eBayes, this function calls