For all possible absolute log2 fold changes, which genes have at least this fold change at a specified False Discovery Rate?

limma_confects(fit, coef = NULL, fdr = 0.05, step = 0.01, trend = FALSE)

## Arguments

fit A limma MArrayLM object. Column number of coefficient or contrast to test. False Discovery Rate to control for. Granularity of log2 fold changes to test. Should treat(..., trend=TRUE) be used?

## Value

See nest_confects for details of how to interpret the result.

## Details

fit should be produced using lmFit, and optionally contrasts.fit if a contrast is needed.